Program 741,
  July 9, 2002

 

A. The DNA Sequencing of Infectious Bacteria

Narrator: This is Science Today. The U.S. Department of Energy has enlisted the services of the California-based Joint Genome Institute to sequence the entire genomes of a variety of infectious bacteria. Susan Lucas oversees the production sequencing of seventeen different pathogens.

Lucas: What's important about sequencing the entire genomes is that if you do several, you can actually compare each genome to figure out why some genomes are more lethal than other genomes. And right now, that's of importance to scientists to help protect the U.S. from bio-threat.

Narrator: While there are no actual pathogens on site, Lucas says twenty-one state-of-the-art sequencing machines are working round-the-clock, six days a week to sequence and assemble the fragmentary DNA of infectious bacteria.

Lucas: Right now this facility can output anywhere from 45 to 50 million base pairs a day - totaling to one billion base pairs a month, which is a third of the human genome.

Narrator: The facility is staffed by researchers from three national laboratories, which are managed by the University of California. For Science Today, I'm Larissa Branin.

B. The Electrical Challenge of Martian Dust Devils

Narrator:This is Science Today. If you've driven through the desert, you've probably seen dust devils-but you might not have known that scientists study these swirling winds in places like Arizona to learn more about the same phenomena on Mars. UC Berkeley physicist Greg DeLory is looking at the effects dust devils might have on robotic and human exploration of the Red Planet.

DeLory: Not only does dust obscure vision and block out the sky, it turns out that all this dust moving around generates frictional charging just like rubbing your feet up against the carpet.

Narrator: And while the electrical charges of earth's dust devils don't amount to much, Martian dust devils can be 100 times wider and ten times higher, and therefore more electrically dangerous.

DeLory: You can imagine dust getting inside a spacesuit seal or an airlock seal and it causing a problem. If it's electrically charged it tends to stick to things, and then the discharges might affect communications, damage computers, damage connectors, all the things that have happened to consumer-level products on earth from shaggy carpets and other things like that.

Narrator: For Science Today, I'm Larissa Branin.

C. A Breakthrough in Research into Huntington's Disease

Narrator: This is Science Today. Huntington's Disease, which afflicts 30 thousand people nationwide, is the most common inherited neurological disorder. It's estimated that an additional 150 thousand people have the gene, but not the symptoms. Dr. Steven Finkbeiner, a researcher at the University of California, San Francisco, says symptoms of Huntington's disease usually begin in midlife

Finkbeiner: The most common symptom is abnormal movements of people's arms and legs. They lose the ability to control those movements. But the disorder can also cause cognitive decline, so it's difficult for people to think and can cause emotional and psychiatric disturbances as well.

Narrator: Scientists know which protein is responsible for the disease, but they don't know how the mutation causes individual neurons to die. But Finkbeiner developed a robotic microscope and computer program that are breakthroughs for research into Huntington's disease.

Finkbeiner: One of the main things this microscope does is help us look at early events, while the neuron is still alive that might still be disturbed by the expression of this abnormal protein.

Narrator: For Science Today, I'm Larissa Branin.

D. Do Patients Prefer Doctors of a Certain Gender or Ethnicity?

Narrator:Do you care whether your doctor is a certain race or gender? This is Science Today. Barbara Gerbert of the University of California, San Francisco, led a team of researchers who studied whether patients prefer to have a doctor of the same gender or ethnicity. She explains the motivation behind the study of ethnic preferences.

Gerbert: We were concerned because we were working in settings in which there were people of various ethnicities and people speaking a number of languages and we wanted to know if patients had a preference for the race of their doctor.

Narrator: The results of the study showed a surprising difference between gender and ethnic preferences.

Gerbert: Almost 80% preferred a woman doctor-but regarding race people were very willing to choose people, doctors, of varying ethnicities, varying races, if they found someone with good communication skills, a warm, kind doctor.

Narrator: For Science Today, I'm Larissa Branin.

E. Mankind's Oldest Biotechnology . . .

Narrator: This is Science Today. Brewing is pretty much mankind's oldest biotechnology. In fact, beer has been brewed for some eight thousand years and according to brewing scientist Charles Bamforth of the University of California, Davis, the first brewing happened by accident.

Bamforth: Somebody in those dim and distant days got some barely wet and it started to sprout and they found that they could stop it sprouting if hey dried it and when they did that and they tasted it, they thought - well, it tastes better. And again, they got the malt wet and then stray organisms came in, some yeast and they turned some of it alcohol and they tasted that and they thought - well, that's even better and it makes us feel nice and cozy and warm as well.

Narrator: Ale was the standard beverage of choice in Northern Europe for centuries until lager was developed.

Bamforth: Lager developed because an edict was brought in so they had to brew beer earlier in the year and need to store it, so that it would be O.K. when the time came around to drink it. And so they realized that if you chilled it down, you could store it and hence, the product was born.

Narrator: For Science Today, I'm Larissa Branin.

 

 

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For comments or more information about Science Today, contact Larissa Branin at larissa.branin@ucop.edu